The four-square cipher uses four 5 by 5 matrices arranged in a square. Each of the 5 by 5 matrices contains the letters of the alphabet (usually omitting "Q" or putting both "I" and "J" in the same location to reduce the alphabet to fit). In general, the upper-left and lower-right matrices are the "plaintext squares" and each contain a standard alphabet. The upper-right and lower-left squares are the "ciphertext squares" and contain a mixed alphabetic sequence.
To generate the ciphertext squares, one would first fill in the spaces in the matrix with the letters of a keyword or phrase (dropping any duplicate letters), then fill the remaining spaces with the rest of the letters of the alphabet in order. The four-square algorithm allows for two separate keys, one for each of the two ciphertext matrices. In the example to the right, "EXAMPLE" and "KEYWORD" have been used as keywords.
a b c d e E X A M P
f g h i j L B C D F
k l m n o G H I J K
p r s t u N O R S T
v w x y z U V W Y ZK E Y W O a b c d e
R D A B C f g h i j
F G H I J k l m n o
L M N P S p r s t u
T U V X Z v w x y z